PyTorch for DNA analysis: Learning resources
- A clear and concise entry into PyTorch fro DNA analysis
- Selene, a PyTorch-based deep learning library for sequence-level data.
- A gentle intrduction on How to implement Genetic Algorithm using PyTorch
- First take on: DNA Classification with Deep Learning
- Biological language models (BLMs) for DNA, RNA and protein sequence analysis
- An article on: Classifying DNA Sequences with Self-Attention andConvolutions
Learning resources for using PyTorch as a DNA analysis platform/tool are scarce and scattered. I have attempted to compile some resources that may help beginners get started on their journey into this versatile and yet unexplored field of genomics with PyTorch. The resources listed are intended to give the biggner different perspectives and opportunities to pick up the subject matter with minimal effort spent locating resources.