genomics

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Genomics with OOD graphic
Genomics with OOD This group is for anyone using Open OnDemand in genomics research. Whether you're working with sequencing data, analyzing genomic information, or optimizing workflows for bioinformatics tools, join us…
data-analysis
genomics
bioinformatics
open-ondemand
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Announcements

Title Date
Ookami Webinar 02/14/24

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Knowledge Base Resources

Title Category Tags Skill Level
Awesome Jupyter Widgets (for building interactive scientific workflows or science gateway tools) Learning ai, computer-graphics, plotting, visualization, big-data, data-analysis, deep-learning, image-processing, machine-learning, monte-carlo, neural-networks, data-sharing, data-lifecycle, data-management, data-management-software, data-reproducibility, github, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, open-ondemand, science-gateway, c++, jupyterhub, python Beginner, Intermediate, Advanced
Biopython Tutorial Learning bioinformatics, genomics, python Beginner, Intermediate, Advanced
How the Little Jupyter Notebook Became a Web App: Managing Increasing Complexity with nbdev Learning data-sharing, data-management-software, data-reproducibility, github, workflow, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, science-gateway, software-carpentry, jupyterhub, programming, python Beginner, Intermediate, Advanced

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People with Expertise

William Feng

Rutgers University-New Brunswick

Programs

CAREERS

Roles

student-facilitator

Placeholder headshot

Expertise

bioinformatics
biology
data-analysis
genomics
java
+5 more tags

Matt Ferguson

Boise State University

Programs

At-Large

Roles

researcher/educator, cssn

picture of Matt Ferguson

Expertise

access
ai
anaconda
bash
bioinformatics
+34 more tags

Carrie Brown

Pennsylvania State University

Programs

CAREERS, ACCESS CSSN, CCMNet

Roles

mentor, cssn, steering committee, CCMNet

Placeholder headshot

Expertise

bioinformatics
cleanup
community-outreach
data-wrangling
distributed-computing
+12 more tags

People with Interest

Natasha Pavlovikj

University of Nebraska, Lincoln

Programs

CCMNet, Campus Champions

Roles

mentor, researcher/educator, research computing facilitator, CCMNet

Placeholder headshot

Interests

anaconda
bash
batch-jobs
big-data
bioinformatics
+30 more tags

Ana Ayala Pazzi

Programs

ACCESS CSSN

Roles

student-facilitator

Placeholder headshot

Interests

bioinformatics
biology
community-outreach
data-analysis
data-science
+9 more tags

Daniel Benedict

Texas Tech University

Programs

CCMNet

Roles

mentor, ci systems engineer, CCMNet

Placeholder headshot

Interests

access
administering-hpc
ansible
anvil
api
+108 more tags