generative-ai
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Upcoming Events & Trainings
| Title | Date |
|---|---|
| NAIRR Pilot Office Hours | 5/13/25 |
| NAIRR Pilot Office Hours | 5/27/25 |
| NAIRR Pilot Office Hours | 6/10/25 |
Topics from Ask.CI
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Knowledge Base Resources
| Title | Category | Tags | Skill Level |
|---|---|---|---|
| Enhancing LLMs with RAG: A Beginner’s Guide | Learning | ai, llm, NAIRR-pilot, generative-ai, nlp, deep-learning, machine-learning, neural-networks, reporting, artificial-intelligence, computer-science, data-science, jupyterhub, python | Beginner |
| HPC-AI Resources for STEM and Non-STEM Researchers | Learning | ai, llm, generative-ai, deep-learning, machine-learning, neural-networks, visualization, artificial-intelligence, computer-science, data-science, hpc-getting-started, professional-development, software-carpentry, training, jupyterhub, python | Beginner |
| Intro to GenAI Chatbot | Learning | ai, generative-ai | Beginner |
Engagements
Re-engineering Lilly’s KisunlaTM into a novel antibody targeting IL13RA2 against GBM using AI-driven macromolecular modeling
Atrium Health Levine Cancer
- Summary and objectives of the proposed experiments:
- An initial research-based Ab (scFv47, discovered by our collaborator Dr. Balyasnikova) model, modeling Ab-Ag (IL13RA2 against GBM) protein complex, and identifying the binding sites (epitopes) using ROSETTA and AlphaFold2 multimer tools.
- Graft the CDRs of scFv (single-chain variable fragment) of antibody or Bispecific T cell engagers (BTEs) onto the template Ab, the framework of Lilly's Kisunla™ Ab drug.
- Modify, improve, and optimize the overall or full antibody protein structures using AI-driven macromolecule modeling (AlphaFold3).
- Explore single nucleotide polymorphism (SNP), pathogenic genetic variants and N-glycosylation of IL13RA2 (target) protein domain interacting with the Ab candidates among the patient population using ROSETTA software packages.
Status: In Progress
People with Expertise
Feseha Abebe-Akele
Elizabeth City State University
Programs
CCMNet
Roles
mentor, researcher/educator, research computing facilitator, CCMNet
Expertise
Dr. Nabeel Alzahrani
California State University-San Bernardino
Programs
Campus Champions, CCMNet
Roles
mentor, researcher/educator, research computing facilitator, research software engineer, ci systems engineer, CCMNet
Expertise
Expertise
People with Interest
Interests
Vikram Gazula
University of Kentucky
Programs
ACCESS CSSN, CCMNet, Campus Champions, Kentucky
Roles
mentor, regional facilitator, research computing facilitator, Affinity Group Leader, KB PM, CCMNet PM, CCMNet
Interests
