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Kenneth Acosta

Rutgers, the State University of New Jersey

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bioinformatics bash python r scripting conda pip unix-environment ssh vpn biology github genomics sftp

Elie Alhajjar

United States Military Academy

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Ana Ayala Pazzi

University of Texas Rio Grande Valley

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biology

Wesley Brashear

Texas A&M University

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r python bioinformatics biology genomics

David Carlson

SUNY at Stony Brook

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gatk trinity bash ookami research-facilitation python r slurm bioinformatics genomics biology singularity

Jacob Fosso Tande

North Carolina State University

Computational Scientist

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sciencedmz data-transfer github jekyll research-facilitation training version-control community-outreach dft computational-chemistry gaussian quantum-mechanics fortran git bash c++python scripting azure cluster-support file-transfer globus compiling software-installation debugging dependencies jupyterhub kubernetes administering-hpc NAIRR-pilot linear-programming data-analysis big-data image-processing aws cloud-computing cloudlab cloud cloud-commercial data-lifecycle data-management data-sharing data-reproducibility data-provenance data-management-software database github-pages workflow storage s3 quota metadata memory IO-issue profiling performance-tuning benchmarking cpu-bound hpc-storage hpc-operations hpc-getting-started dtn gpu nvidia unix-environment environment-modules modules os permissions ssh ACCESS ACCESS-allocations bridges-2 expanse jetstream open-science-grid stampede3 campus-champions abstract proposal-development workforce-development software-carpentry research-grants professional-development mentorship citation gcc programming-best-practices programming lsf pbs schedulers core-hours job-submission job-sizing resources chemistry data-compliance containers pip singularity interactive-mode library-paths lmod docker

Fernando Garzon

University of California, San Diego

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Xiaoqin Huang

Rice University

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ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal anvil bridges-2 darwin delta documentation expanse rockfish stampede2 transfer-su xdmod tickets data-analysis deep-learning dft machine-learning neural-networks openstack globus github benchmarking checkpoint debugging memory optimization parallelization performance-tuning profiling scaling scripting amber bioinformatics charmm gamess gaussian gromacs lammps molecular-dynamics namd pytorch tensorflow biology computational-chemistry data-science genomics quantum-mechanics open-ondemand cgroups condo gpu nvidia batch-jobs schedulers job-array bash git pthreads ssh proposal-development research-facilitation research-grants community-outreach anaconda c c++compiling conda cuda fortran jupyterhub mpi openmp openmpi programming python containers dependencies easybuild docker interactive-mode pip singularity software-installation

masoud keramati

Northeastern University

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shuai liu

University of Arkansas

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Alison McClellan

Stanford University

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r python project-management research-facilitation research-grants biology computational-chemistry genomics

Timothy Middelkoop

Internet2

Research Engagement Engineer

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ACCESS CSSN, Campus Champions, CCMNet, Great Plains

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workforce-development python batch-jobs kubernetes software-carpentry containers docker dependencies version-control spack software-installation singularity podman pip lmod interactive-mode putty slurm core-hours scheduling gcc jupyterhub programming programming-best-practices rstudio-server sql abstract citation community-outreach professional-development project-management proposal-development research-facilitation research-grants training jetstream osg affinity-group ACCESS-allocations bash environment-modules git git-lfs modules os permissions screen scripting ssh tcp tmux vim vm administering-hpc ansible cluster cluster-management cluster-support configuration-automation deployment DNS ethernet file-systems hardware hpc-cluster-architecture hpc-cluster-build hpc-getting-started hpc-operations hpc-storage hpc-tools htc infiniband interconnect networking nfs provisioning puppet unix-environment api debugging data-transfer data-sharing file-transfer github github-pages globus s3 quota scratch sftp aws azure cloud cloud-commercial cloud-computing cloud-open-source cloud-storage cloudlab gce openstack linear-programming open-storage-network

Sami Muslmani

University of Arizona

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Alyssa Pivirotto

Bryn Mawr College

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data-analysis github bash conda python r bioinformatics biology data-science genomics

Kaitlyn Varela

The University of Texas at San Antonio

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data-analysis optimization biology community-outreach

Jason Wells

Harvard University

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