People

Feseha Abebe-Akele

Elizabeth City State University

Assistant Professor

Programs

CCMNet

Skills

password account login profile generative-ai unsupervised-learning supervised-learning machine-learning big-data data-analysis cloud-computing cloud-open-source archiving backup data-access-protocols data-transfer data-wrangling database file-formats file-system workflow storage sftp quota metadata github-pages github file-transfer benchmarking scaling gatk api galaxy file-systems unix-environment bash os permissions screen scripting ssh tmux vim git ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website adding-users allocation-management allocations-proposal allocations-extension project-renewal SU bridges-2 stampede3 stampede2 ranch jetstream abstract affiliations citation community-outreach mentorship professional-development workforce-development training research-grants research-facilitation proposal-development xsede publication-database c compiling conda gcc gui java mpi sas r python programming-best-practices programming perl openmpi sql xml slurm process-killed pending-jobs batch-jobs job-submission bioinformatics biology data-science genomics putty vpn duo data-compliance centos dependencies docker library-paths software-installation singularity pip documentation trinity containers data-sharing hpc-getting-started

John Acheampong

Cuny SPS

Programs

CAREERS

Skills

python programming-best-practices software-installation conda biology github

Kenneth Acosta

Rutgers, the State University of New Jersey

Programs

CAREERS, ACCESS CSSN

Skills

bioinformatics bash python r scripting conda pip unix-environment ssh vpn biology github genomics sftp

Eren Ada

University of Rhode Island

Programs

CAREERS

Skills

big-data community-outreach software-carpentry bioinformatics fastx gatk biology git github java r anaconda bash docker openmp compiling rstudio-server jupyterhub dependencies vim

Danial Ahmed

JP Stevens

Programs

CAREERS

Skills

community-outreach molecular-dynamics matlab

Elie Alhajjar

United States Military Academy

Programs

ACCESS CSSN, CCMNet

Skills

Ana Ayala Pazzi

University of Texas Rio Grande Valley

Programs

ACCESS CSSN

Skills

biology

Daniel Benedict

Texas Tech University

Programs

CCMNet

Skills

Alexandra Bozan

Rutgers, The State University of New Jersey,

Programs

Skills

data-analysis data-wrangling project-management biology machine-learning pytorch scikit-learn github version-control python sql anaconda scripting conda debugging pip

Wesley Brashear

Texas A&M University

Programs

ACCESS CSSN, Campus Champions

Skills

r python bioinformatics biology genomics

David Carlson

SUNY at Stony Brook

Programs

ACCESS CSSN, OnDemand

Skills

gatk trinity bash ookami research-facilitation python r slurm bioinformatics genomics biology singularity

Thomas Cheatham

University of Utah

Professor / Director

Programs

Campus Champions

Skills

management community-outreach proposal-development workforce-development computational-chemistry molecular-dynamics gpu

Frédéric Chevalier

Texas Biomedical Research Institute

Programs

Campus Champions

Skills

Hening Cui

Columbia University

Programs

CAREERS

Skills

data-analysis sas bioinformatics biology machine-learning scikit-learn neural-networks natural-language-processing programming cleanup java python r sql

Nicholas Danes

Colorado School of Mines

Computational Scientist

Programs

Campus Champions, MINES

Skills

fluid-dynamics anaconda distributed-computing cpu-bound performance-tuning compiling software-installation mpi pip biology fortran python research-facilitation job-array

Bala Desinghu

Harvard University

Rutgers University

Programs

ACCESS CSSN, Campus Champions, CAREERS, Northeast

Skills

proposal-request ai big-data data-analysis deep-learning dft image-processing machine-learning monte-carlo neural-networks parameter-sweeps plotting vectorization visualization random-numbers cloud-computing cloud-storage github globus s3 sftp data-management data-transfer data-sharing optimization parallelization scaling benchmarking bioinformatics molecular-dynamics natural-language-processing opencv tensorflow pytorch gaussian gromacs computational-chemistry data-science materials-science quantum-mechanics open-ondemand distributed-computing unix-environment batch-jobs pre-emption schedulers bash environment-modules git screen ssh vim professional-development proposal-development research-facilitation research-grants software-carpentry training anaconda c c++compiling conda fortran jupyterhub mathematica matlab programming python r rstudio-server scikit-learn putty vnc vpn containers dependencies docker pip podman singularity software-installation quantum-computing api job-array slurm sge pbs community-outreach

Maureen Donlin

Saint Louis University

Programs

Great Plains, OnDemand

Skills

research-facilitation research-grants bioinformatics biology

Yves Dubief

University of Vermont

Associate Professor

Programs

Northeast

Skills

big-data molecular-dynamics python mpi

Gregory Ezike

New Jersey Institute of Technology

Programs

CAREERS

Skills

biology github programming c++c java python sql mpi vm vim bash

William Feng

Rutgers University-New Brunswick

Programs

CAREERS

Skills

genomics biology java r python programming programming-best-practices sql bioinformatics data-analysis

Matt Ferguson

Boise State University

Associate Professor of Physics

Programs

At-Large

Skills

Rob Harbert

Stonehill College

Assistant Professor of Biology and Bioinformatics

Programs

Northeast

Skills

anaconda biology github big-data bioinformatics genomics gis r sas distributed-computing batch-jobs sftp ssh open-ondemand

Chris Hemme

University of Rhode Island

Bioinformatics Core Director

Programs

CAREERS

Skills

big-data bioinformatics r data-analysis anaconda genomics biology

Russell Hofmann

Internet2

Programs

ACCESS CSSN, CCMNet

Skills

data-analysis machine-learning dft scaling pytorch gromacs gaussian molecular-dynamics computational-chemistry data-science genomics research-facilitation python spark spack kubernetes training

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