People

Kenneth Acosta

Rutgers, the State University of New Jersey

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CAREERS, ACCESS CSSN

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bioinformatics bash python r scripting conda pip unix-environment ssh vpn biology github genomics sftp

Elie Alhajjar

United States Military Academy

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ACCESS CSSN, CCMNet

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Sean Anderson

Wake Forest University

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ACCESS CSSN, Campus Champions, CCMNet, OnDemand

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open-ondemand administering-hpc slurm research-facilitation software-installation

Ana Ayala Pazzi

University of Texas Rio Grande Valley

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biology

Wesley Brashear

Texas A&M University

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ACCESS CSSN, Campus Champions

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r python bioinformatics biology genomics

Carrie Brown

Pennsylvania State University

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CAREERS, ACCESS CSSN, CCMNet

Skills

cleanup data-wrangling github job-array research-facilitation training community-outreach workforce-development bioinformatics genomics github-pages python r sas scripting software-carpentry distributed-computing

Katia Bulekova

Boston University

Manager of Scientific Programming and Applications

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ACCESS CSSN, Campus Champions, CAREERS, CCMNet, Northeast

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David Carlson

SUNY at Stony Brook

Programs

ACCESS CSSN, OnDemand

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gatk trinity bash ookami research-facilitation python r slurm bioinformatics genomics biology singularity

Bala Desinghu

Harvard University

Rutgers University

Programs

ACCESS CSSN, Campus Champions, CAREERS, Northeast

Skills

proposal-request ai big-data data-analysis deep-learning dft image-processing machine-learning monte-carlo neural-networks parameter-sweeps plotting vectorization visualization random-numbers cloud-computing cloud-storage github globus s3 sftp data-management data-transfer data-sharing optimization parallelization scaling benchmarking bioinformatics molecular-dynamics natural-language-processing opencv tensorflow pytorch gaussian gromacs computational-chemistry data-science materials-science quantum-mechanics open-ondemand distributed-computing unix-environment batch-jobs pre-emption schedulers bash environment-modules git screen ssh vim professional-development proposal-development research-facilitation research-grants software-carpentry training anaconda c c++compiling conda fortran jupyterhub mathematica matlab programming python r rstudio-server scikit-learn putty vnc vpn containers dependencies docker pip podman singularity software-installation quantum-computing api job-array slurm sge pbs community-outreach

Juanjo Garcia Mesa

Arizona State University

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Campus Champions, CCMNet, ACCESS CSSN

Skills

llm profiling parallelization bash git vim ACCESS-allocations jetstream software-carpentry c++python r batch-jobs job-array job-submission slurm bioinformatics

Xiaoqin Huang

Rice University

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ACCESS CSSN

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ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal anvil bridges-2 darwin delta documentation expanse rockfish stampede2 transfer-su xdmod tickets data-analysis deep-learning dft machine-learning neural-networks openstack globus github benchmarking checkpoint debugging memory optimization parallelization performance-tuning profiling scaling scripting amber bioinformatics charmm gamess gaussian gromacs lammps molecular-dynamics namd pytorch tensorflow biology computational-chemistry data-science genomics quantum-mechanics open-ondemand cgroups condo gpu nvidia batch-jobs schedulers job-array bash git pthreads ssh proposal-development research-facilitation research-grants community-outreach anaconda c c++compiling conda cuda fortran jupyterhub mpi openmp openmpi programming python containers dependencies easybuild docker interactive-mode pip singularity software-installation

James Hutcheson

Baylor University

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Campus Champions, ACCESS CSSN

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masoud keramati

Northeastern University

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shuai liu

University of Arkansas

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woman facing camera on a sunny day with bay in background

Alison McClellan

Stanford University

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r python project-management research-facilitation research-grants biology computational-chemistry genomics

Sami Muslmani

University of Arizona

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biology physiology abstract citation community-outreach publication-database research-facilitation

Od Odbadrakh

University of Tennessee, Knoxville

Computational Scientist

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Alyssa Pivirotto

Bryn Mawr College

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ACCESS CSSN, Campus Champions

Skills

data-analysis github bash conda python r bioinformatics biology data-science genomics

Xilin Qiao

University of Wisconsin-Madison

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Nannan Shan

Purdue University

Senior Computational Scientist

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CCMNet, ACCESS CSSN

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Swabir Silayi

George Mason University

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Cesar Sul

University of Southern California

Programs

ACCESS CSSN, Campus Champions

Skills

astrophysics batch-jobs slurm job-array job-submission bash vim git python c mathematica pip singularity lmod spack pegasus parameter-sweeps monte-carlo modules permissions tmux ssh training research-facilitation matlab

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