People

Feseha Abebe-Akele

Elizabeth City State University

Assistant Professor

Programs

CCMNet

Skills

password account login profile generative-ai unsupervised-learning supervised-learning machine-learning big-data data-analysis cloud-computing cloud-open-source archiving backup data-access-protocols data-transfer data-wrangling database file-formats file-system workflow storage sftp quota metadata github-pages github file-transfer benchmarking scaling gatk api galaxy file-systems unix-environment bash os permissions screen scripting ssh tmux vim git ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website adding-users allocation-management allocations-proposal allocations-extension project-renewal SU bridges-2 stampede3 stampede2 ranch jetstream abstract affiliations citation community-outreach mentorship professional-development workforce-development training research-grants research-facilitation proposal-development xsede publication-database c compiling conda gcc gui java mpi sas r python programming-best-practices programming perl openmpi sql xml slurm process-killed pending-jobs batch-jobs job-submission bioinformatics biology data-science genomics putty vpn duo data-compliance centos dependencies docker library-paths software-installation singularity pip documentation trinity containers data-sharing hpc-getting-started

John Acheampong

Cuny SPS

Programs

CAREERS

Skills

python programming-best-practices software-installation conda biology github

Kenneth Acosta

Rutgers, the State University of New Jersey

Programs

CAREERS, ACCESS CSSN

Skills

bioinformatics bash python r scripting conda pip unix-environment ssh vpn biology github genomics sftp

Eren Ada

University of Rhode Island

Programs

CAREERS

Skills

big-data community-outreach software-carpentry bioinformatics fastx gatk biology git github java r anaconda bash docker openmp compiling rstudio-server jupyterhub dependencies vim

Mohsen Ahmadkhani

South Dakota State University

HPC Software Development Engineer

Programs

CCMNet, ACCESS CSSN

Skills

Elie Alhajjar

United States Military Academy

Programs

ACCESS CSSN, CCMNet

Skills

Anas Alsobeh

Southern Illinois University, Carbondale

Assistant Professor

Programs

CCMNet, Campus Champions

Skills

ai cognitive-bias generative-ai llm machine-learning deep-learning computer-vision supervised-learning unsupervised-learning nlp data-analysis image-processing visualization neural-networks computer-graphics data-management-software data-sharing data-transfer github database metadata data-management data-lifecycle data storage tuning optimization tensorflow pytorch natural-language-processing opencv cluster-management gpu nvidia file-systems git ssh scripting ACCESS ACCESS-account FABRIC abstract affiliations citation community-outreach management mentorship professional-development project-management proposal-development publication-database research-facilitation research-grants software-carpentry workforce-development training python c++conda css cuda gcc gui hadoop java html javascript openmp programming programming-best-practices sql spss xml scikit-learn react artificial-intelligence data-science computer-science social-sciences psychology cybersecurity data-security pip account application-status authentication login password proposal-request verification-code NAIRR-pilot software-installation

Ana Ayala Pazzi

University of Texas Rio Grande Valley

Programs

ACCESS CSSN

Skills

biology

Devin Bayly

University of Arizona

Data and Visualization Consultant

Programs

ACCESS CSSN, Campus Champions, CCMNet

Skills

Alexandra Bozan

Rutgers, The State University of New Jersey,

Programs

Skills

data-analysis data-wrangling project-management biology machine-learning pytorch scikit-learn github version-control python sql anaconda scripting conda debugging pip

Wesley Brashear

Texas A&M University

Programs

ACCESS CSSN, Campus Champions

Skills

r python bioinformatics biology genomics

David Carlson

SUNY at Stony Brook

Programs

ACCESS CSSN, OnDemand

Skills

gatk trinity bash ookami research-facilitation python r slurm bioinformatics genomics biology singularity

Frédéric Chevalier

Texas Biomedical Research Institute

Programs

Campus Champions

Skills

Hening Cui

Columbia University

Programs

CAREERS

Skills

data-analysis sas bioinformatics biology machine-learning scikit-learn neural-networks natural-language-processing programming cleanup java python r sql

Nicholas Danes

Colorado School of Mines

Computational Scientist

Programs

Campus Champions, MINES

Skills

fluid-dynamics anaconda distributed-computing cpu-bound performance-tuning compiling software-installation mpi pip biology fortran python research-facilitation job-array

Bala Desinghu

Harvard University

Rutgers University

Programs

ACCESS CSSN, Campus Champions, CAREERS, Northeast

Skills

proposal-request ai big-data data-analysis deep-learning dft image-processing machine-learning monte-carlo neural-networks parameter-sweeps plotting vectorization visualization random-numbers cloud-computing cloud-storage github globus s3 sftp data-management data-transfer data-sharing optimization parallelization scaling benchmarking bioinformatics molecular-dynamics natural-language-processing opencv tensorflow pytorch gaussian gromacs computational-chemistry data-science materials-science quantum-mechanics open-ondemand distributed-computing unix-environment batch-jobs pre-emption schedulers bash environment-modules git screen ssh vim professional-development proposal-development research-facilitation research-grants software-carpentry training anaconda c c++compiling conda fortran jupyterhub mathematica matlab programming python r rstudio-server scikit-learn putty vnc vpn containers dependencies docker pip podman singularity software-installation quantum-computing api job-array slurm sge pbs community-outreach

Maureen Donlin

Saint Louis University

Programs

Great Plains, OnDemand

Skills

research-facilitation research-grants bioinformatics biology

Gregory Ezike

New Jersey Institute of Technology

Programs

CAREERS

Skills

biology github programming c++c java python sql mpi vm vim bash

William Feng

Rutgers University-New Brunswick

Programs

CAREERS

Skills

genomics biology java r python programming programming-best-practices sql bioinformatics data-analysis

Matt Ferguson

Boise State University

Associate Professor of Physics

Programs

At-Large

Skills

Anish Gaikwad

New Jersey Institute of Technology

Programs

CAREERS

Skills

big-data aws opencv pytorch machine-learning scikit-learn python sql data-analysis

Rob Harbert

Stonehill College

Assistant Professor of Biology and Bioinformatics

Programs

Northeast

Skills

anaconda biology github big-data bioinformatics genomics gis r sas distributed-computing batch-jobs sftp ssh open-ondemand

Chris Hemme

University of Rhode Island

Bioinformatics Core Director

Programs

CAREERS

Skills

big-data bioinformatics r data-analysis anaconda genomics biology

Xiaoqin Huang

Rice University

Programs

ACCESS CSSN

Skills

ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal anvil bridges-2 darwin delta documentation expanse rockfish stampede2 transfer-su xdmod tickets data-analysis deep-learning dft machine-learning neural-networks openstack globus github benchmarking checkpoint debugging memory optimization parallelization performance-tuning profiling scaling scripting amber bioinformatics charmm gamess gaussian gromacs lammps molecular-dynamics namd pytorch tensorflow biology computational-chemistry data-science genomics quantum-mechanics open-ondemand cgroups condo gpu nvidia batch-jobs schedulers job-array bash git pthreads ssh proposal-development research-facilitation research-grants community-outreach anaconda c c++compiling conda cuda fortran jupyterhub mpi openmp openmpi programming python containers dependencies easybuild docker interactive-mode pip singularity software-installation

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