People

Kenneth Acosta

Rutgers, the State University of New Jersey

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CAREERS, ACCESS CSSN

Skills

bioinformatics bash python r scripting conda pip unix-environment ssh vpn biology github genomics sftp

Sean Anderson

Wake Forest University

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ACCESS CSSN, Campus Champions, CCMNet, OnDemand

Skills

open-ondemand administering-hpc slurm research-facilitation software-installation

Michael Blackmon

Davidson College

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Campus Champions, ACCESS CSSN

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Katia Bulekova

Boston University

Manager of Scientific Programming and Applications

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ACCESS CSSN, Campus Champions, CAREERS, CCMNet, Northeast

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Lonnie Crosby

University of Tennessee, Knoxville

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Campus Champions, ACCESS CSSN

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James Deaton

Great Plains Network

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Bala Desinghu

Harvard University

Rutgers University

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proposal-request ai big-data data-analysis deep-learning dft image-processing machine-learning monte-carlo neural-networks parameter-sweeps plotting vectorization visualization random-numbers cloud-computing cloud-storage github globus s3 sftp data-management data-transfer data-sharing optimization parallelization scaling benchmarking bioinformatics molecular-dynamics natural-language-processing opencv tensorflow pytorch gaussian gromacs computational-chemistry data-science materials-science quantum-mechanics open-ondemand distributed-computing unix-environment batch-jobs pre-emption schedulers bash environment-modules git screen ssh vim professional-development proposal-development research-facilitation research-grants software-carpentry training anaconda c c++compiling conda fortran jupyterhub mathematica matlab programming python r rstudio-server scikit-learn putty vnc vpn containers dependencies docker pip podman singularity software-installation quantum-computing api job-array slurm sge pbs community-outreach

Jacob Fosso Tande

North Carolina State University

Computational Scientist

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sciencedmz data-transfer github jekyll research-facilitation training version-control community-outreach dft computational-chemistry gaussian quantum-mechanics fortran git bash c++python scripting azure cluster-support file-transfer globus compiling software-installation debugging dependencies jupyterhub kubernetes administering-hpc NAIRR-pilot linear-programming data-analysis big-data image-processing aws cloud-computing cloudlab cloud cloud-commercial data-lifecycle data-management data-sharing data-reproducibility data-provenance data-management-software database github-pages workflow storage s3 quota metadata memory IO-issue profiling performance-tuning benchmarking cpu-bound hpc-storage hpc-operations hpc-getting-started dtn gpu nvidia unix-environment environment-modules modules os permissions ssh ACCESS ACCESS-allocations bridges-2 expanse jetstream open-science-grid stampede3 campus-champions abstract proposal-development workforce-development software-carpentry research-grants professional-development mentorship citation gcc programming-best-practices programming lsf pbs schedulers core-hours job-submission job-sizing resources chemistry data-compliance containers pip singularity interactive-mode library-paths lmod docker

Fernando Garzon

University of California, San Diego

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Daniel Howard

University Corporation for Atmospheric Research

HPC Consultant

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Xiaoqin Huang

Rice University

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ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal anvil bridges-2 darwin delta documentation expanse rockfish stampede2 transfer-su xdmod tickets data-analysis deep-learning dft machine-learning neural-networks openstack globus github benchmarking checkpoint debugging memory optimization parallelization performance-tuning profiling scaling scripting amber bioinformatics charmm gamess gaussian gromacs lammps molecular-dynamics namd pytorch tensorflow biology computational-chemistry data-science genomics quantum-mechanics open-ondemand cgroups condo gpu nvidia batch-jobs schedulers job-array bash git pthreads ssh proposal-development research-facilitation research-grants community-outreach anaconda c c++compiling conda cuda fortran jupyterhub mpi openmp openmpi programming python containers dependencies easybuild docker interactive-mode pip singularity software-installation

masoud keramati

Northeastern University

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Julie Ma

MGHPCC

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ACCESS CSSN, At-Large, Campus Champions, CAREERS, CCMNet, Northeast, OnDemand

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hardware hpc-cluster-architecture cpu-architecture workforce-development project-management professional-development open-ondemand

Timothy Middelkoop

Internet2

Research Engagement Engineer

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ACCESS CSSN, Campus Champions, CCMNet, Great Plains

Skills

workforce-development python batch-jobs kubernetes software-carpentry containers docker dependencies version-control spack software-installation singularity podman pip lmod interactive-mode putty slurm core-hours scheduling gcc jupyterhub programming programming-best-practices rstudio-server sql abstract citation community-outreach professional-development project-management proposal-development research-facilitation research-grants training jetstream osg affinity-group ACCESS-allocations bash environment-modules git git-lfs modules os permissions screen scripting ssh tcp tmux vim vm administering-hpc ansible cluster cluster-management cluster-support configuration-automation deployment DNS ethernet file-systems hardware hpc-cluster-architecture hpc-cluster-build hpc-getting-started hpc-operations hpc-storage hpc-tools htc infiniband interconnect networking nfs provisioning puppet unix-environment api debugging data-transfer data-sharing file-transfer github github-pages globus s3 quota scratch sftp aws azure cloud cloud-commercial cloud-computing cloud-open-source cloud-storage cloudlab gce openstack linear-programming open-storage-network

Andrew Monaghan

University of Colorado, Boulder

Research Computing Analyst

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Doruk Alp MUTLU

Michigan State University

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Skills

data-analysis image-processing visualization github optimization opencv data-science slurm vim git c++c compiling jupyterhub mathematica programming programming-best-practices python pip

Od Odbadrakh

University of Tennessee, Knoxville

Computational Scientist

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Picture of me standing in front of a tree

Soham Pal

University of Illinois at Urbana-Champaign

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Parameshwaran Pasupathy

Rutgers, the State University of New Jersey

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Iman Rahbari

University of Southern California

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Campus Champions, ACCESS CSSN, CCMNet

Skills

data-analysis machine-learning fluid-dynamics comsol openfoam paraview tensorflow bash modules ssh fortran python openmpi scikit-learn matlab mpi singularity pip software-installation rdp vnc

Nannan Shan

Purdue University

Senior Computational Scientist

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CCMNet, ACCESS CSSN

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Yun Shen

Boston University

Scientific Program Analyst

Programs

CAREERS, Northeast, ACCESS CSSN, CCMNet

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data-analysis big-data bioinformatics genomics data-science programming r sql software-installation Programming open-ondemand

Sathish Srinivasan

Programs

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Skills

ai machine-learning big-data image-processing linear-programming data-analysis visualization data-lifecycle database github sftp cephfs data-provenance data-reproducibility data-wrangling benchmarking profiling fastx gatk opencv pytorch tensorflow galaxy pegasus ansible ceph administering-hpc cluster-management cluster cifs hpc-cluster-architecture networking nfs unix-environment smb hpc-tools prometheus bash cleanup environment-modules git git-lfs modules os permissions screen scripting ssh tcp tcsh tmux vim vm x11 c c++compiling css fortran gcc html java julia mathematica matlab perl programming pthreads python r rstudio-server sas scikit-learn spark spss sql stata xml hadoop batch-jobs lsf pbs slurm sge acls federated-authentication key-management firewall putty rdp vpn vnc terminal-emulation-and-window-management centos containers dependencies docker kubernetes lmod pip podman singularity software-installation version-control

Cesar Sul

University of Southern California

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astrophysics batch-jobs slurm job-array job-submission bash vim git python c mathematica pip singularity lmod spack pegasus parameter-sweeps monte-carlo modules permissions tmux ssh training research-facilitation matlab

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