People

Paul Rulis

University of Missouri, Kansas City

Associate Professor of Physics

Programs

Campus Champions

Skills

dft machine-learning monte-carlo neural-networks vectorization parameter-sweeps random-numbers github metadata sftp storage core-dump cpu-bound debugging memory optimization parallelization performance-tuning profiling scaling scripting tuning checkpoint lammps molecular-dynamics paraview pytorch tensorflow materials-science quantum-mechanics comet gpu unix-environment batch-jobs core-hours job-accounting job-submission job-sizing pending-jobs schedulers scheduling slurm bash environment-modules git ssh tcp vim x11 permissions modules os proposal-development project-management research-grants software-carpentry xsede c c++conda fortran java programming openmp mpi programming-best-practices python sql putty encryption vpn terminal-emulation-and-window-management library-paths spack software-installation version-control singularity ai data-analysis computational-chemistry resources abstract affiliations citation xml dependencies

William Sanders

The Jackson Laboratory

Director, Research IT Infrastructure and Data Services

Programs

Campus Champions

Skills

research-grants software-carpentry bioinformatics machine-learning programming c c++python containers

Grant Scott

University of Missouri

Director, Data Science and Analytics & Assistant Professor EECS

Programs

Great Plains

Skills

Nannan Shan

Purdue University

Senior Computational Scientist

Programs

CCMNet, ACCESS CSSN

Skills

Yun Shen

Boston University

Scientific Program Analyst

Programs

CAREERS, Northeast, ACCESS CSSN, CCMNet

Skills

data-analysis big-data bioinformatics genomics data-science programming r sql software-installation Programming open-ondemand

Seung Woo Son

University of Massachusetts Lowell

Programs

Northeast

Skills

ceph storage debugging distributed-computing file-systems hadoop tuning programming tensorflow parallelization mpi

Yongwook Song

University of Kentucky

Computational Research Engineer

Programs

Kentucky

Skills

big-data deep-learning machine-learning azure tensorflow

Gil Speyer

Arizona State University

Scientific Software Engineer

Programs

ACCESS CSSN, Campus Champions

Skills

parallelization optimization memory profiling scaling scripting debugging bioinformatics computational-chemistry quantum-mechanics bash training conda cuda c fortran matlab r gpu

Sathish Srinivasan

Programs

ACCESS CSSN

Skills

ai machine-learning big-data image-processing linear-programming data-analysis visualization data-lifecycle database github sftp cephfs data-provenance data-reproducibility data-wrangling benchmarking profiling fastx gatk opencv pytorch tensorflow galaxy pegasus ansible ceph administering-hpc cluster-management cluster cifs hpc-cluster-architecture networking nfs unix-environment smb hpc-tools prometheus bash cleanup environment-modules git git-lfs modules os permissions screen scripting ssh tcp tcsh tmux vim vm x11 c c++compiling css fortran gcc html java julia mathematica matlab perl programming pthreads python r rstudio-server sas scikit-learn spark spss sql stata xml hadoop batch-jobs lsf pbs slurm sge acls federated-authentication key-management firewall putty rdp vpn vnc terminal-emulation-and-window-management centos containers dependencies docker kubernetes lmod pip podman singularity software-installation version-control

Ronald Stesiak

Individual / Unaffiliated

Programs

Skills

ai computer-vision machine-learning deep-learning neural-networks unsupervised-learning supervised-learning reinforcement-learning data-analysis monte-carlo plotting random-numbers vectorization linear-programming cephfs data data-access-protocols data-management data-management-software data-retention data-sharing data-transfer data-wrangling database file-system file-transfer github storage benchmarking debugging optimization parallelization performance-tuning profiling scaling timing-issue tuning opencv pytorch tensorflow gaussian administering-hpc ceph cluster cluster-management cluster-support cpu-architecture distributed-computing DNS ethernet file-systems gpu hardware hpc-cluster-architecture hpc-cluster-build hpc-getting-started hpc-operations hpc-storage networking nfs nvidia provisioning unix-environment bash git scripting tcsh ssh tcp vim vm ACCESS ACCESS-account ACCESS-allocations allocations-proposal project-renewal ookami professional-development mentorship research-grants xsede c c++hadoop compiling conda cuda fortran gcc html mathematica matlab mpi programming-best-practices openmp openmpi perl programming python r scikit-learn sql batch-jobs job-submission process-killed slurm artificial-intelligence computer-science data-science electrical-engineering mathematics neuroscience particle-physics quantum-computing statistics quantum-mechanics data-security encryption key-management firewall putty vnc containers docker

Cody Stevens

Wake Forest University

Programs

Campus Champions, CCMNet

Skills

Emma Strand

University of Rhode Island

Programs

CAREERS

Skills

Michael Sundue

The University of Vermont, Dept. of Plant Biology

Programs

Northeast

Skills

bioinformatics

Diana Toups Dugas

New Mexico State University

Director for Instructional and Research Support

Programs

Campus Champions

Skills

research-facilitation training proposal-development workforce-development bioinformatics genomics software-carpentry biology

Ifeoma Ugwuanyi

Rutgers University-Newark

Programs

CAREERS

Skills

data-analysis bioinformatics genomics biology python r sql

Juan Vanegas

Oregon State University

Programs

Northeast

Skills

bash batch-jobs bioinformatics compiling conda environment-modules hpc-cluster-build hpc-operations jupyterhub molecular-dynamics nfs pip python slurm ssh storage x11 mpi

Jabin Wade

Prairie View A&M University

Programs

Skills

Ying Zhang

University of Rhode Island

Associate Professor

Programs

CAREERS

Skills

bioinformatics

People

Skills

Skills

Organization

Program