People

Feseha Abebe-Akele

Elizabeth City State University

Assistant Professor

Programs

CCMNet

Skills

password account login profile generative-ai unsupervised-learning supervised-learning machine-learning big-data data-analysis cloud-computing cloud-open-source archiving backup data-access-protocols data-transfer data-wrangling database file-formats file-system workflow storage sftp quota metadata github-pages github file-transfer benchmarking scaling gatk api galaxy file-systems unix-environment bash os permissions screen scripting ssh tmux vim git ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website adding-users allocation-management allocations-proposal allocations-extension project-renewal SU bridges-2 stampede3 stampede2 ranch jetstream abstract affiliations citation community-outreach mentorship professional-development workforce-development training research-grants research-facilitation proposal-development xsede publication-database c compiling conda gcc gui java mpi sas r python programming-best-practices programming perl openmpi sql xml slurm process-killed pending-jobs batch-jobs job-submission bioinformatics biology data-science genomics putty vpn duo data-compliance centos dependencies docker library-paths software-installation singularity pip documentation trinity containers data-sharing hpc-getting-started

Eren Ada

University of Rhode Island

Programs

CAREERS

Skills

big-data community-outreach software-carpentry bioinformatics fastx gatk biology git github java r anaconda bash docker openmp compiling rstudio-server jupyterhub dependencies vim

Dr. Nabeel Alzahrani

California State University-San Bernardino

Adjunct Professor of Computer Science and Engineering

Programs

Campus Champions, CCMNet

Skills

David Carlson

SUNY at Stony Brook

Programs

ACCESS CSSN, OnDemand

Skills

gatk trinity bash ookami research-facilitation python r slurm bioinformatics genomics biology singularity

Frédéric Chevalier

Texas Biomedical Research Institute

Programs

Campus Champions

Skills

Jacob Fosso Tande

North Carolina State University

Computational Scientist

Programs

ACCESS CSSN, Campus Champions, CCMNet

Skills

sciencedmz data-transfer github jekyll research-facilitation training version-control community-outreach dft computational-chemistry gaussian quantum-mechanics fortran git bash c++python scripting azure cluster-support file-transfer globus compiling software-installation debugging dependencies jupyterhub kubernetes administering-hpc NAIRR-pilot linear-programming data-analysis big-data image-processing aws cloud-computing cloudlab cloud cloud-commercial data-lifecycle data-management data-sharing data-reproducibility data-provenance data-management-software database github-pages workflow storage s3 quota metadata memory IO-issue profiling performance-tuning benchmarking cpu-bound hpc-storage hpc-operations hpc-getting-started dtn gpu nvidia unix-environment environment-modules modules os permissions ssh ACCESS ACCESS-allocations bridges-2 expanse jetstream open-science-grid stampede3 campus-champions abstract proposal-development workforce-development software-carpentry research-grants professional-development mentorship citation gcc programming-best-practices programming lsf pbs schedulers core-hours job-submission job-sizing resources chemistry data-compliance containers pip singularity interactive-mode library-paths lmod docker

Fernando Garzon

University of California, San Diego

Programs

ACCESS CSSN

Skills

Jordan Hayes

University of California-Riverside

Programs

Campus Champions

Skills

bash anaconda singularity modules gpfs slurm duo compiling conda jupyterhub mpi pip rstudio-server jekyll xml big-data data-management data-transfer file-formats aws cyverse training software-carpentry bioinformatics fastx gatk genomics smrt trinity gaussian gromacs amber charmm namd pytorch scikit-learn comsol atlas git github github-pages programming programming-best-practices cleanup version-control c pthreads c++fortran java python r sql xsede scheduling job-array pending-jobs pre-emption api batch-jobs checkpoint dmtcp docker kubernetes distributed-computing environment-modules parameter-sweeps cpu-bound scripting tmux screen terminal-emulation-and-window-management administering-hpc cluster-management cgroups prometheus cluster-support file-transfer globus x11 vpn ssh smb sftp samba rdp putty vnc federated-authentication cilogon hardware infiniband interconnect nvidia hpc-cluster-build gpu acls hpc-storage cifs nfs spectrum-scale networking dtn ethernet firewall sciencedmz tcp schedulers sge pbs encryption key-management software-installation easybuild spark unix-environment vim vm

Xiaoqin Huang

Rice University

Programs

ACCESS CSSN

Skills

ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal anvil bridges-2 darwin delta documentation expanse rockfish stampede2 transfer-su xdmod tickets data-analysis deep-learning dft machine-learning neural-networks openstack globus github benchmarking checkpoint debugging memory optimization parallelization performance-tuning profiling scaling scripting amber bioinformatics charmm gamess gaussian gromacs lammps molecular-dynamics namd pytorch tensorflow biology computational-chemistry data-science genomics quantum-mechanics open-ondemand cgroups condo gpu nvidia batch-jobs schedulers job-array bash git pthreads ssh proposal-development research-facilitation research-grants community-outreach anaconda c c++compiling conda cuda fortran jupyterhub mpi openmp openmpi programming python containers dependencies easybuild docker interactive-mode pip singularity software-installation

David Liu

Purdue University

Programs

CCMNet

Skills

ai deep-learning generative-ai machine-learning llm NAIRR-pilot neural-networks supervised-learning reinforcement-learning nlp unsupervised-learning linear-programming monte-carlo big-data aws azure cloud cloud-computing cloud-open-source cloud-storage account application-status change-organization delete-account documentation email-change email-duplication profile password login license errors proposal-request reporting tickets verification-code archiving backup data data-access-protocols data-lifecycle data-management data-management-software data-provenance data-reproducibility data-retention data-sharing data-transfer data-wrangling database doi file-formats file-system file-transfer github file-limit github-pages globus metadata quota s3 workflow weka storage sftp scratch checkpoint core-dump cpu-bound dmtcp memory profiling scaling benchmarking debugging IO-issue parallelization optimization performance-tuning tuning timing-issue xalt opencv natural-language-processing pytorch tensorflow api open-ondemand science-gateway administering-hpc cluster-management cgroups gpu DNS hpc-cluster-architecture sdn serverless-hpc provisioning nfs networking bash cleanup environment-modules screen git vim permissions modules os scripting vm x11 ssh tcp tcsh tmux ACCESS ACCESS-account ACCESS-allocations anvil FABRIC expanse open-science-grid jetstream abstract affiliations campus-champions management community-outreach citation mentorship professional-development project-management publication-database research-grants software-carpentry research-facilitation training workforce-development xsede anaconda c c++compiling conda html hadoop gcc gui fortran cuda java javascript julia jupyterhub openmp mpi openmpi programming programming-best-practices pthreads python sas Rust react scikit-learn spark spss sql xml batch-jobs core-hours gridengine job-charging job-array job-accounting job-failure job-sizing job-submission lsf pre-emption pending-jobs pbs process-killed resources slurm schedulers sge scheduling artificial-intelligence computer-science computational-chemistry data-science materials-science mathematics quantum-computing statistics cybersecurity duo encryption federated-authentication firewall key-management putty rdp spectrum-scale secure-data-architecture terminal-emulation-and-window-management vpn vnc containers dependencies docker kubernetes pip version-control software-installation

Daniel Morales

Florida International University

Programs

Campus Champions

Skills

Raghunandan Pratoori

Iowa State University

Programs

ACCESS CSSN

Skills

Chris Reidy

University of Arizona

Research Facilitation Manager

Programs

Campus Champions, CCMNet

Skills

Sebastian Sensale

Cleveland State University

Programs

Campus Champions

Skills

molecular-dynamics namd amber lammps matlab python expanse bridges-2 stampede2 bash

Sathish Srinivasan

Programs

ACCESS CSSN

Skills

ai machine-learning big-data image-processing linear-programming data-analysis visualization data-lifecycle database github sftp cephfs data-provenance data-reproducibility data-wrangling benchmarking profiling fastx gatk opencv pytorch tensorflow galaxy pegasus ansible ceph administering-hpc cluster-management cluster cifs hpc-cluster-architecture networking nfs unix-environment smb hpc-tools prometheus bash cleanup environment-modules git git-lfs modules os permissions screen scripting ssh tcp tcsh tmux vim vm x11 c c++compiling css fortran gcc html java julia mathematica matlab perl programming pthreads python r rstudio-server sas scikit-learn spark spss sql stata xml hadoop batch-jobs lsf pbs slurm sge acls federated-authentication key-management firewall putty rdp vpn vnc terminal-emulation-and-window-management centos containers dependencies docker kubernetes lmod pip podman singularity software-installation version-control

Kesong Yang

University of California, San Diego

Programs

ACCESS CSSN

Skills

expanse materials-science computational-chemistry python c++

People

Skills

Organization

Program