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Knowledge Base Resources

These resources are contributed by researchers, facilitators, engineers, and HPC admins. Please upvote resources you find useful!
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CyberAmbassadors: Professional Skills for Interdisciplinary Work
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  • CyberAmbassador Program
The CyberAmbassadors project was funded through a workforce development grant from the National Science Foundation (Award #1730137). Starting in 2017, the initial focus of this project was to develop, test, and refine new curriculum to help CyberInfrastructure (CI) Professionals strengthen their communications, teamwork and leadership skills. With support and collaboration from a number of academic and professional organizations, the CyberAmbassadors project was expanded to offer professional skills training to college students and professionals working across STEM (science, technology, engineering, math) disciplines.
mentorshipprofessional-developmentresearch-facilitationtrainingworkforce-development
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Type
learning
Level
Beginner, Intermediate, Advanced
What is VPN? How It Works, Types of VPN
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  • What is VPN? How It Works, Types of VPN
A VPN, or Virtual Private Network, is a technology that creates a secure tunnel between your device and a VPN server. This tunnel encrypts all of your traffic, making it unreadable to anyone who tries to intercept it.
vpn
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Type
website
Level
Beginner
Language models and using HPC resources
0
  • AI-Generated Text Detection In 2023
Documentation and research based on the latest NLP text generation detection methods for 2023.
natural-language-processing
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Type
learning
Level
Intermediate
Neurodesk
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  • Neurodesk
Neurodesk provides a containerised data analysis environment to facilitate reproducible analysis of neuroimaging data. Analysis pipelines for neuroimaging data typically rely on specific versions of packages and software, and are dependent on their native operating system. These dependencies mean that a working analysis pipeline may fail or produce different results on a new computer, or even on the same computer after a software update. Neurodesk provides a platform in which anyone, anywhere, using any computer can reproduce your original research findings given the original data and analysis code.
psychologycontainerssoftware-installationversion-control
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Type
website
Level
Beginner, Intermediate, Advanced
ACCESS KB Guide - DELTA
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  • ACCESS KB Guide - DELTA
NCSA is the home of Delta, a computing and data resource that balances cutting-edge graphics processor and CPU architectures with a non-POSIX file system with a POSIX-like interface. Delta allows applications to reap the benefits of modern file systems without rewriting code.
delta
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Type
documentation
Level
Beginner, Intermediate, Advanced
A guide to pip in Python
0
  • Pip Guide
pip stands for "pip installs packages". It's the go-to package manager for Python, allowing developers to install, update, and manage software libraries and dependencies used in Python projects. With just a few commands in your terminal or command prompt, pip makes it effortless to fetch libraries from the Python Package Index (PyPI) and integrate them into your projects. This guide will walk you through the basics of pip, from installation to advanced package management.
pipsoftware-installation
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Type
learning
Level
Beginner, Intermediate
Data Visualization Tools for Julia
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  • Visualizations in Julia Using Plots.jl
  • Plotting Options Using Julia
Plots.jl is the most widely used plotting library for the Julia programming language. It's known for being especially powerful in its versatility and intuitiveness. It's limited set of dependencies and wide applicability across different graphics packages make it especially helpful in visualizing the results of your latest Julia implementation. However, there are still multiple options available for Julia programmers to visualize their datasets. The second link details a comparison against a variety of Julia packages.
plottingvisualizationjulia
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Type
tool
Level
Beginner, Intermediate
Slurm Tutorials
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  • Slurm Tutorials
Introduction to the Slurm Workload Manager for users and system administrators, plus some material for Slurm programmers.
administering-hpccluster-managementhpc-cluster-architecturetraining
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Type
learning
Level
Beginner
Long Tales of Science: A podcast about women in HPC
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  • Long Tales of Science
A series of interviews with women in the HPC community
science-gatewaycommunity-outreachprofessional-developmentproject-managementproposal-developmenttrainingworkforce-developmentxsede
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Type
website
Level
Beginner, Intermediate, Advanced
CMake Tutorials
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  • CMake Tutorials
CMake is an open-source tool used to manage the build process in operating systems. This tutorial takes you through how to use CMake from the very basics with example projects.
trainingcompiling
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Type
learning
Level
Beginner, Intermediate, Advanced
Texas A&M HPRC Training Site
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  • Texas A&M Research Computing Training Resources
Training Resources and Courses offered by Texas A&M's Research Computing Group
ACESTAMU
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Type
learning
Level
Beginner, Intermediate, Advanced
Ask.CI Q&A Platform for Research Computing
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  • Ask.CI
resourcesprogramming-best-practices
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Type
website
Level
Beginner, Intermediate, Advanced
EasyBuild Documentation
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  • EasyBuild Documentation
  • EasyConfigs Repository
EasyBuild is a software installation framework that allows administrators to easily build and install software on high-performance computing (HPC) systems. It supports a wide range of software packages, toolchains, and compilers. Supported software are found in the EasyConfigs repository, one of several resositories in EasyBuild project.
easybuild
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Type
documentation
Level
Intermediate
Online Master's in Business Analytics Program Guide - TechGuide
0
  • Find Online Master's in Business Analytics
A degree in business analytics looks different in today’s world than it did a decade ago. In its most current application, business analytics uses modern data science and capabilities in machine learning (ML). The magic comes into play when these are leveraged for strategic planning.
machine-learningbig-datadata-analysisdata-science
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Type
website
Level
Advanced
Docker - Containerized, reproducible workflows
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  • Docker Documentation
Docker allows for containerization of any task - basically a smaller, scalable version of a virtual machine. This is very useful when transferring work across computing environments, as it ensures reproducibility.
documentationcloud-computingdeep-learning
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Type
tool
Level
Intermediate, Advanced
Oakridge Leadership Computing Facility (OLCF) Training Events and Archive
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  • OLCF User Training Main Site
  • OLCF Training Calendar
  • OLCF Training Archive
  • OLCF Training Github
Upcoming training events and archives of training materials detailing general HPC best practices as well as how to use OLCF resources and services.
training
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Type
learning
Level
Beginner, Intermediate, Advanced
ACCESS Video Learning Center
0
  • Video Learning Center
A library of short videos about ACCESS allocations, resources and support.
training
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Type
video_link
Level
Beginner
Factor Graphs and the Sum-Product Algorithm
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  • https://ieeexplore.ieee.org/document/910572
A tutorial paper that presents a generic message-passing algorithm, the sum-product algorithm, that operates in a factor graph. Following a single, simple computational rule, the sum-product algorithm computes either exactly or approximately various marginal functions derived from the global function. A wide variety of algorithms developed in artificial intelligence, signal processing, and digital communications can be derived as specific instances of the sum-product algorithm, including the forward/backward algorithm, the Viterbi algorithm, the iterative "turbo" decoding algorithm, Pearl's (1988) belief propagation algorithm for Bayesian networks, the Kalman filter, and certain fast Fourier transform (FFT) algorithms
ACCESS-accountaimachine-learning
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Type
documentation
Level
Intermediate
Scipy Lecture Notes
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  • https://lectures.scientific-python.org/
Comprehensive tutorials and lecture notes covering various aspects of scientific computing using Python and Scipy.
visualizationdata-analysismachine-learningpython
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Type
learning
Level
Beginner, Intermediate
Why Mentoring Matters and How to Get Started
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  • Why Mentoring Matters and How to Get Started
Describes effective mentorship (both ways).
mentorshipprofessional-development
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Type
website
Level
Beginner
Official Python Documentation
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  • Python 3.11.5 Documentation
The official documentation for Python 3.11.5. Python comes with a lot of features built into the language, so it is worth taking a look as you code.
documentationpython
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Type
documentation
Level
ConnectCI
0
  • https://cnct.ci
Connect.Cybinfrastructure is a family of portals, each representing a program that is serving a segment of the research computing and data community. Each portal provides program-specific information, as well a custom "view" into a common database. The portal was originally developed to support project workflows and a knowledge base of self service learning resources for the Northeast Cyberteam. Subsequently, it was expanded to provide support to multiple cyberteams and other research computing communities of practice. We welcome additional communities, please contact us if you are interested in participating. Central to the Portal is an extensive and ever-evolving tagging infrastructure which informs every aspect of the Portal. The tag taxonomy was initially developed by the Northeast Cyberteam to categorize subject matter relevant to practitioners of Research Computing Facilitation and is ever changing due to the frequent introduction of new technology in domains that characterize the field of research computing.
community-outreach
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Type
website
Level
Beginner, Intermediate, Advanced
Understanding LLM Fine-tuning
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  • The Ultimate Guide to LLM Fine Tuning: Best Practices & Tools
With the recent uprising of LLM's many business are looking at way to adopt these LLMs and fine-tuning these models on specfic data sets to ensure accuracy. These models when fine-tuned can be optimal for fulfilling the specific needs of a company. This site explains explicitly when, how, and why models should be trained. It goes over various strategies for LLM fine -tuning.
big-datatraining
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Type
learning
Level
Beginner, Intermediate
AHPCC documentary
0
  • Arkansas High Performance Computing Center
This link is a documentary website to use AHPCC.
loginbatch-jobsslurmbashsshpythonmpi
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Type
documentation
Level
Beginner, Intermediate

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Topics

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  • ai (43)
  • training (41)
  • data-analysis (39)
  • deep-learning (28)
  • documentation (28)
  • big-data (26)
  • neural-networks (24)
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  • cybersecurity (12)
  • gpu (12)
  • r (12)
  • pytorch (11)
  • slurm (10)
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